rentrez

ANNOVAR — efficient Perl-based tool for functional annotation of genetic variants from diverse genomes. Supports gene-based, region-based, and filter-based annotation using 100+ databases including Cl

1 shared topic • 1 shared operation

BEAST2 — Bayesian Evolutionary Analysis by Sampling Trees. Cross-platform Java application for Bayesian phylogenetic inference using MCMC sampling. Use when estimating time-calibrated phylogenies, rel

1 shared topic • 1 shared operation

Latch SDK — Python-native bioinformatics workflow platform for registering, executing, and sharing reproducible workflows on cloud infrastructure. Define workflows with @workflow and @task decorators,

1 shared topic • 1 shared operation

OrthoFinder — fast, accurate ortholog inference for comparative genomics. Identifies orthogroups, orthologs, gene trees, rooted species trees, and gene duplication events from protein or nucleotide se

1 shared topic • 1 shared operation

RAxML-NG — maximum likelihood phylogenetic tree inference using iterative SPR moves with libpll likelihood computation. Supports DNA, protein, binary, and multi-state data with partitioned analyses, n

1 shared topic • 1 shared operation