MSBooster — deep-learning rescoring tool for proteomics database search results. Predicts peptide retention time, ion mobility, and MS2 fragmentation spectra using models via Koina (Prosit, AlphaPeptD
Use with AI
Install the MCP server or CLI to instantly fetch MSBooster documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/msbooster
AlphaFold Database — public repository of 200M+ AI-predicted protein structures maintained by DeepMind and EMBL-EBI. Access predictions by UniProt accession via REST API at alphafold.ebi.ac.uk. Downlo
1 shared topic • 2 shared operations
AlphaFold2 — deep learning system for predicting 3D protein structures from amino acid sequences with atomic-level accuracy. Uses multiple sequence alignments (MSAs) and an attention-based Evoformer a
1 shared topic • 2 shared operations
ColabFold — fast protein structure prediction combining AlphaFold2 with MMseqs2 for rapid MSA generation. Predict monomer and multimer structures, generate multiple sequence alignments, run batch pred
1 shared topic • 2 shared operations
Prosit — deep learning framework for predicting MS2 fragment ion spectra and indexed retention times (iRT) from peptide sequences. Enables in silico spectral library generation for any organism and pr
1 shared topic • 2 shared operations
Deep learning system for protein structure prediction from amino acid sequence with atomic accuracy — revolutionized structural biology.
1 shared topic • 1 shared operation