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mOTUs (marker gene-based Operational Taxonomic Units) is a computational tool for taxonomic profiling of microbial communities from metagenomic and metatranscriptomic shotgun sequencing data. Uses 10
Use with AI
Install the MCP server or CLI to instantly fetch mOTUs documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/motus
Use when working with dental or oral microbiome analysis — profiling microbial communities from saliva, dental plaque, gingival crevicular fluid, tongue dorsum, or buccal mucosa. Covers 16S rRNA ampli
2 shared topics • 1 shared operation
Kaiju is a fast taxonomic classifier for metagenomic sequencing reads using protein-level sequence matching. Translates DNA reads into amino acid sequences and compares against NCBI protein reference
2 shared topics • 1 shared operation
metaSPAdes — de novo metagenomic assembler from the SPAdes suite using iterative de Bruijn graphs with multiple k-mer sizes optimized for uneven-coverage metagenomes. Assembles short-read (Illumina pa
2 shared topics • 1 shared operation
2 shared topics • 1 shared operation
VirSorter2 is a multi-classifier pipeline for identifying DNA and RNA viral sequences from metagenomic and genomic assemblies. It supports dsDNA phage, ssDNA, RNA, NCLDV, and lavidaviridae groups, out
2 shared topics • 1 shared operation