LipidSig

metaX routing skill for metabolomics and lipidomics data analysis. Use this skill when users mention metaX, metaXpipe, QC-RLSC normalization, metabolomics peak intensity normalization, LC-MS data prep

3 shared topics • 1 shared operation

MetaboAnalyst — comprehensive R package and web platform for metabolomics data analysis and interpretation. Provides statistical analysis (t-test, ANOVA, PCA, PLS-DA), pathway analysis (KEGG, SMPDB),

2 shared topics • 1 shared operation

PathVisio biological pathway editor and analysis tool. Draw and edit biological pathways in GPML (Graphical Pathway Markup Language) format. Load gene expression or metabolomics data onto pathways for

2 shared topics • 1 shared operation

Use when working with AUCell — an R/Python tool for scoring gene set activity in single cells using the Area Under the Curve (AUC) metric. Computes per-cell activity scores for gene sets (regulons, pa

1 shared topic • 2 shared operations

clusterProfiler — universal enrichment analysis tool for interpreting omics data using Gene Ontology, KEGG pathways, WikiPathways, Reactome, Disease Ontology, and custom gene sets. Implements over-rep

1 shared topic • 2 shared operations