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geNomad — identify viruses and plasmids in metagenomic assemblies and isolate genomes using neural-network sequence embeddings and marker gene profiles. Classifies sequences as chromosome, plasmid, or
Use with AI
Install the MCP server or CLI to instantly fetch geNomad documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/genomad
VIBRANT — metagenomics tool for identifying and annotating viruses from microbial assemblies (metagenomes, isolates, and virome datasets). Uses neural networks and KEGG/Pfam/VOG HMM profiles to classi
2 shared topics • 1 shared operation
FoodMicrobionet routing skill for food microbiome network analysis, food microbial ecology, and co-occurrence network construction from 16S rRNA amplicon data. Use this skill when users mention FoodMi
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Use when working with microeco — an R6-class R package for microbiome community ecology analysis. Handles OTU/ASV tables, taxonomy, sample metadata, and phylogenetic trees in a unified microtable obje
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