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GA4GH Beacon — federated genomic variant discovery API standard developed by the Global Alliance for Genomics and Health. Query whether a specific genomic variant (SNV, indel, CNV, structural variant)
Use with AI
Install the MCP server or CLI to instantly fetch GA4GH Beacon documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/ga4gh-beacon
BAGEL2 — Bayesian Analysis of Gene Essentiality v2 for identifying essential genes from CRISPR/Cas9 knockout screens. Calculates Bayes Factors from fold-change distributions using reference sets of co
2 shared topics • 1 shared operation
medaka -- neural network-based tool from Oxford Nanopore Technologies for creating consensus sequences and calling variants from nanopore sequencing data. Polishes draft assemblies from Flye, miniasm,
2 shared topics • 1 shared operation
Open Targets Platform — large-scale target identification and prioritization resource integrating genetic, genomic, and disease evidence for drug target discovery. Provides REST API and Python client
2 shared topics • 1 shared operation
PharmGKB — Pharmacogenomics Knowledge Base for curated gene-drug relationships, clinical pharmacogenomics annotations, drug pathway diagrams, and VIP gene summaries. Query the PharmGKB REST API for va
2 shared topics • 1 shared operation
Telomere biology toolkit for measuring telomere length from sequencing data, analyzing telomere repeat content, detecting ALT (Alternative Lengthening of Telomeres) pathways, and studying telomere str
2 shared topics • 1 shared operation