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Use when working with data.table — the high-performance R package for fast data manipulation, aggregation, and file I/O on large datasets. data.table extends data.frame with a concise DT[i, j, by] syn
Use with AI
Install the MCP server or CLI to instantly fetch data.table documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/datatable
MatrixEQTL — ultra-fast R package for eQTL, sQTL, and pQTL mapping using large matrix operations. Supports cis and trans analysis with linear and ANOVA models, multiple covariates, and FDR-corrected o
3 shared topics
Meryl — fast k-mer counting and set-operation toolkit from the Marbl group (Canu/Verkko). Counts canonical or strand-specific k-mers from FASTA/FASTQ inputs into binary meryl databases, then supports
2 shared topics • 1 shared operation
ncbi-genome-download is a Python CLI tool and library for bulk downloading genome sequences and associated files from NCBI RefSeq and GenBank FTP servers. Supports all taxonomic groups (bacteria, fung
2 shared topics • 1 shared operation
Philosopher — fast, scalable Go toolkit for shotgun proteomics data analysis. Provides database downloading, peptide validation (PeptideProphet), protein inference (ProteinProphet), PTM localization (
2 shared topics • 1 shared operation
RTG Tools — Java-based toolkit from Real Time Genomics for haplotype-aware variant call comparison, VCF filtering, statistics, and pedigree analysis. Primary use: vcfeval for benchmarking variant call
2 shared topics • 1 shared operation