Coralnet

QuPath — open-source platform for whole slide image analysis and digital pathology. Provides interactive tools for tissue detection via thresholding, cell detection and positive cell classification (H

1 shared topic • 2 shared operations

Cellpose — generalist deep learning algorithm for cellular and nuclear segmentation in microscopy images. Provides GPU-accelerated 2D and 3D instance segmentation using gradient flow representations,

1 shared topic • 1 shared operation

Open Data Cube (ODC) is an open-source geospatial data management and analysis framework that indexes Earth observation satellite imagery and gridded datasets into a PostgreSQL catalogue and exposes t

1 shared topic • 1 shared operation

sdm (R) is a reproducible framework for species distribution modelling (SDM) that unifies data preparation, multi-method model fitting, evaluation, ensemble forecasting, and spatial/temporal predictio

1 shared topic • 1 shared operation

xorca (eXtensible ORCA Grid Adapter) preprocesses NEMO ocean model NetCDF outputs into XGCM-compatible Xarray datasets for grid-aware operations on curvilinear ORCA grids. Use when working with NEMO s

1 shared topic • 1 shared operation