AlphaTims

GRITS Toolbox is a free, open-source desktop application for processing, annotating, and archiving glycomics mass spectrometry data. It automates MS/MS spectral annotation of glycan fragments against

1 shared topic • 1 shared operation

mzR routing skill for metabolomics and lipidomics raw mass spectrometry data parsing. Use this skill when users mention mzR, openMSfile, mzML parsing, mzXML reading, mzData, netCDF mass spec, ProteoWi

1 shared topic • 1 shared operation

PRIDE tools are EMBL-EBI proteomics data repository utilities for submitting, querying, and downloading mass spectrometry datasets from the PRIDE Archive. Use this skill for ProteomeXchange dataset su

1 shared topic • 1 shared operation

RawTools — open-source C# toolkit for parsing and quality control of Thermo Orbitrap RAW mass spectrometry files from DDA experiments. Extracts scan metadata, generates QC metrics for instrument monit

1 shared topic • 1 shared operation

Use when working with Crux — the University of Washington Noble Lab's open-source toolkit for bottom-up tandem mass spectrometry (MS/MS) proteomics analysis. Covers the full peptide identification pip

1 shared topic