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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 621 | Cytoscape | Systems Biology | Systems Biology | 35.74 | +8% |
| 622 | Dash Bio -- Interactive Bioinformatics Visualization | Proteomics | Proteomics | 35.74 | +8% |
Data as of: Apr 12, 2026
| 623 | deconstructSigs | Clinical Genomics | Clinical Genomics | 35.74 | +8% |
| 624 | Decoupler -- Biological Activity Inference from Omics Data | Transcriptomics | Transcriptomics | 35.74 | +8% |
| 625 | destiny | Single-Cell | Single-Cell | 35.74 | +8% |
| 626 | DEXSeq | Transcriptomics | Transcriptomics | 35.74 | +8% |
| 627 | Dfam | Genomics | Genomics | 35.74 | +8% |
| 628 | Dipy | Imaging | Imaging | 35.74 | +8% |
| 629 | EmptyDrops (DropletUtils) | Transcriptomics | Transcriptomics | 35.74 | +8% |
| 630 | ENCODE Pipeline | Epigenomics | Epigenomics | 35.74 | +8% |