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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 1453 | SILVA | Utilities & Infrastructure | Utilities & Infrastructure | 26.7 | +3% |
| 1452 | SignalP | Genomics | Genomics | 26.7 | +3% |
Data as of: Apr 12, 2026
| 1451 | ShortRead | QC & Preprocessing | QC & Preprocessing | 26.7 | +3% |
| 1450 | sequoia | Other | Other | 26.7 | +3% |
| 1449 | Sei | Genomics | Genomics | 26.7 | +3% |
| 1448 | scverse | Single-Cell | Single-Cell | 26.7 | +3% |
| 1447 | SCTransform | Single-Cell | Single-Cell | 26.7 | +3% |
| 1446 | SCpubr | Visualization | Visualization | 26.7 | +3% |
| 1445 | scMoMaT | Systems Biology | Systems Biology | 26.7 | +3% |
| 1444 | scimap | Imaging | Imaging | 26.7 | +3% |