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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 130 | Estimate Compute Requirements | Single-Cell | Single-Cell | 40.3 | +10% |
| 632 | ETE Toolkit | Phylogenetics | Phylogenetics | 35.74 | +8% |
Data as of: Apr 12, 2026
| 1625 | Eugene | Systems Biology | Systems Biology | 24.3 | +3% |
| 1875 | eulerr | Imaging | Imaging | 21.84 | +3% |
| 1239 | EVE | Genomics | Genomics | 26.7 | +3% |
| 863 | Evo | Machine Learning | Machine Learning | 29.4 | +3% |
| 1240 | EvoAug | Genomics | Genomics | 26.7 | +3% |
| 864 | EvoDiff | Structure Prediction | Structure Prediction | 29.4 | +3% |
| 1626 | exactextractr | Utilities & Infrastructure | Utilities & Infrastructure | 24.3 | +3% |
| 633 | Exomiser -- Phenotype-Driven Variant Prioritization | Genomics | Genomics | 35.74 | +8% |