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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 1571 |
| Anacapa |
| Metagenomics |
| Metagenomics |
| 24.3 |
| +3% |
| 599 | Analyze Sample Metadata | Transcriptomics | Transcriptomics | 35.74 | +8% |
| 756 | ANGSD | Population Genetics | Population Genetics | 29.7 | +3% |
| 1815 | AnimalGenome.org | Other | Other | 22.68 | +3% |
| 482 | Ankh | Machine Learning | Machine Learning | 35.8 | +8% |
| 351 | AnnData | Single-Cell | Single-Cell | 37.3 | +8% |
| 1572 | AnnData on disk | Workflows | Workflows | 24.3 | +3% |
| 1116 | AnnotationHub | Utilities & Infrastructure | Utilities & Infrastructure | 26.7 | +3% |