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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 326 | LSHTM Pipelines | Metagenomics | Metagenomics | 38.74 | +8% |
| 327 | MAGeCK -- Model-based Analysis of Genome-wide CRISPR-Knockout | Genomics | Genomics | 38.74 | +8% |
Data as of: Apr 12, 2026
| 328 | minimap2-Based Phylogenetics | Phylogenetics | Phylogenetics | 38.74 | +8% |
| 329 | Minipolish | Genomics | Genomics | 38.74 | +8% |
| 330 | MIP | Workflows | Workflows | 38.74 | +8% |
| 331 | Mutect2 -- GATK Somatic Short Variant Caller | Genomics | Genomics | 38.74 | +8% |
| 332 | OptiType | Clinical Genomics | Clinical Genomics | 38.74 | +8% |
| 334 | Pfam | Utilities & Infrastructure | Utilities & Infrastructure | 38.74 | +8% |
| 335 | phantompeakqualtools | Epigenomics | Epigenomics | 38.74 | +8% |
| 336 | Pilon | Genomics | Genomics | 38.74 | +8% |