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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 307 |
| BWA-MEM2 |
| Genomics |
| Genomics |
| 38.74 |
| +8% |
| 308 | Circos | Imaging | Imaging | 38.74 | +8% |
| 309 | CNVkit -- Copy Number Variant Detection | Genomics | Genomics | 38.74 | +8% |
| 310 | CONCOCT | Metagenomics | Metagenomics | 38.74 | +8% |
| 311 | cooler | Genomics | Genomics | 38.74 | +8% |
| 313 | EAGLE | Transcriptomics | Transcriptomics | 38.74 | +8% |
| 314 | EIGENSOFT smartpca -- Principal Component Analysis for Population Genetics | Genomics | Genomics | 38.74 | +8% |
| 315 | Fastq Screen | QC & Preprocessing | QC & Preprocessing | 38.74 | +8% |