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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 21 | SBayesR / SBayesRC | Population Genetics | Population Genetics | 62.68 | +15% |
| 22 | StringTie | Transcriptomics | Transcriptomics | 62.68 |
Data as of: Apr 12, 2026
| 23 | Cvxpy | Statistics | Statistics | 61.84 | +17% |
| 24 | Filtlong | QC & Preprocessing | QC & Preprocessing | 60.76 | +15% |
| 25 | Seurat | Single-Cell | Single-Cell | 59.08 | +17% |
| 26 | Rioxarray | Other | Other | 58.48 | +15% |
| 27 | Nc Time Axis | Other | Other | 52.36 | +8% |
| 28 | Crux | Metagenomics | Metagenomics | 50.98 | +10% |
| 29 | PyDESeq2 | Transcriptomics | Transcriptomics | 50.86 | +10% |
| 30 | Opentsne | Statistics | Statistics | 49.78 | +8% |