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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 365 | OrthoFinder | Phylogenetics | Phylogenetics | 36.52 | +8% |
| 360 | Clair3 -- Long-Read Germline Variant Calling | Genomics | Genomics | 36.7 | +10% |
Data as of: Apr 12, 2026
| 361 | FlashLFQ | Proteomics | Proteomics | 36.7 | +10% |
| 362 | GiardiaDB | Metagenomics | Metagenomics | 36.7 | +8% |
| 353 | UNOISE3 | Metagenomics | Metagenomics | 36.76 | +8% |
| 354 | Clustal Omega | Phylogenetics | Phylogenetics | 36.76 | +10% |
| 355 | CNVpytor | Clinical Genomics | Clinical Genomics | 36.76 | +10% |
| 356 | fetchChromSizes | Genomics | Genomics | 36.76 | +10% |
| 357 | Flye | Genomics | Genomics | 36.76 | +10% |
| 358 | Snippy | Phylogenetics | Phylogenetics | 36.76 | +10% |