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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 161 | MACS2/MACS3 | Epigenomics | Epigenomics | 38.86 | +8% |
| 162 | NanoStat | QC & Preprocessing | QC & Preprocessing | 38.86 | +8% |
Data as of: Apr 12, 2026
| 163 | NextDenovo | Genomics | Genomics | 38.86 | +8% |
| 164 | Pangolin | Phylogenetics | Phylogenetics | 38.86 | +8% |
| 165 | PRINSEQ++ | QC & Preprocessing | QC & Preprocessing | 38.86 | +8% |
| 166 | Purge_dups | Genomics | Genomics | 38.86 | +8% |
| 167 | pybedtools | Utilities & Infrastructure | Utilities & Infrastructure | 38.86 | +8% |
| 168 | Pyrodigal | Metagenomics | Metagenomics | 38.86 | +8% |
| 169 | Qualimap | QC & Preprocessing | QC & Preprocessing | 38.86 | +8% |
| 170 | REGENIE | Population Genetics | Population Genetics | 38.86 | +8% |