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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 413 | OWLTools | Systems Biology | Systems Biology | 36.34 | +8% |
| 412 | HyPhy | Phylogenetics | Phylogenetics | 36.34 | +8% |
Data as of: Apr 12, 2026
| 411 |
| fMRIPrep |
| Imaging |
| Imaging |
| 36.34 |
| +10% |
| 410 | EMAN2 | Structure Prediction | Structure Prediction | 36.34 | +8% |
| 409 | CWLtool | Workflows | Workflows | 36.34 | +8% |
| 408 | CellPhoneDB | Single-Cell | Single-Cell | 36.34 | +8% |
| 407 | arcasHLA | Clinical Genomics | Clinical Genomics | 36.34 | +8% |
| 406 | xarray-spatial | Other | Other | 36.4 | +8% |
| 405 | Truvari | Genomics | Genomics | 36.4 | +8% |
| 404 | Trimmomatic | QC & Preprocessing | QC & Preprocessing | 36.4 | +8% |