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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 424 |
| wateRmelon |
| Epigenomics |
| Epigenomics |
| 36.04 |
| +8% |
| 420 | GEO Database | Genomics | Genomics | 36.16 | +8% |
| 407 | arcasHLA | Clinical Genomics | Clinical Genomics | 36.34 | +8% |
| 408 | CellPhoneDB | Single-Cell | Single-Cell | 36.34 | +8% |
| 409 | CWLtool | Workflows | Workflows | 36.34 | +8% |
| 410 | EMAN2 | Structure Prediction | Structure Prediction | 36.34 | +8% |
| 411 | fMRIPrep | Imaging | Imaging | 36.34 | +10% |
| 412 | HyPhy | Phylogenetics | Phylogenetics | 36.34 | +8% |