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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 577 | scCODA | Single-Cell | Single-Cell | 35.8 | +8% |
| 578 | scFoundation | Machine Learning | Machine Learning | 35.8 | +8% |
Data as of: Apr 12, 2026
| 579 | scGPT | Machine Learning | Machine Learning | 35.8 | +8% |
| 580 | Sentieon | Clinical Genomics | Clinical Genomics | 35.8 | +8% |
| 581 | SigProfiler | Clinical Genomics | Clinical Genomics | 35.8 | +8% |
| 582 | SIP | Genomics | Genomics | 35.8 | +8% |
| 583 | Slingshot | Transcriptomics | Transcriptomics | 35.8 | +8% |
| 584 | spatialdata | Imaging | Imaging | 35.8 | +8% |
| 585 | Squidpy | Imaging | Imaging | 35.8 | +10% |
| 586 | STRING-db | Utilities & Infrastructure | Utilities & Infrastructure | 35.8 | +8% |