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Top bioinformatics tools ranked by usage across 104 tools.
Data as of: Apr 12, 2026
| 102 | CytoML | Single-Cell | Single-Cell | 21.84 | +3% |
| 103 | Scfates | Single-Cell | Single-Cell | 21.84 | +3% |
| 104 | inferCNV | Single-Cell | Single-Cell | 20.28 | +3% |
| 2 | Scanpy | Single-Cell | Single-Cell | 44.92 | +8% |
| 3 | Cell Ranger | Single-Cell | Single-Cell | 42.94 | +8% |
| 4 | Seacells | Single-Cell | Single-Cell | 40.6 | +8% |
| 6 | Nebulosa | Single-Cell | Single-Cell | 39.7 | +8% |
| 7 | chromVAR | Single-Cell | Single-Cell | 38.86 | +8% |