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Browse the BioContext7 deep skill library. Tool pages surface documentation, registry links, and install details for agent-facing workflows.
2 tools matching filters — page 1 of 1
| Tool | Registry | Domain | Docs |
|---|---|---|---|
Cufflinks — RNA-seq transcript assembly, quantification, and differential expression suite. Assembles aligned reads into transcripts (cufflinks), performs differential expression analysis at transcrip | cole-trapnell-lab/cufflinks | Transcriptomics | 10 |
Use when merging multiple Cufflinks transcript assemblies into a unified transcriptome for downstream differential expression analysis with Cuffdiff. Covers the full Cuffmerge workflow: creating assem | cole-trapnell-lab/cufflinks | Transcriptomics | 8 |