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Browse the BioContext7 deep skill library. Tool pages surface documentation, registry links, and install details for agent-facing workflows.
2 tools matching filters — page 1 of 1
| Tool | Registry | Domain | Docs |
|---|---|---|---|
Sambamba — high-performance BAM/CRAM processing tool written in D with native multi-threading. Provides fast sorting, indexing, duplicate marking, merging, filtering, depth calculation, flagstat, and | biod/sambamba | Genomics | 11 |
Sambamba mkdup routes duplicate-marking workflows for coordinate-sorted BAM files using `sambamba markdup`. Use this skill when a user needs to mark or remove duplicate reads, tune `--hash-table-size` | biod/sambamba | Utilities & Infrastructure | 8 |