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ZINB-WaVE (Zero-Inflated Negative Binomial Wave) for dimensionality reduction and normalization of single-cell RNA-seq data. Fits a zero-inflated negative binomial (ZINB) model to scRNA-seq count matr
Use with AI
Install the MCP server or CLI to instantly fetch ZINB-WaVE documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/zinbwave
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scDblFinder — Bioconductor R package for detecting doublets in single-cell RNA-seq data using simulation-based classification with gradient boosting. Identifies neotypic and heterotypic doublets in dr
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SEACells — single-cell metacell identification using kernel archetypal analysis. Aggregates highly similar single cells into metacells that preserve transcriptional and epigenomic heterogeneity while
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