repo2docker

Use this skill when users need AWS Batch for containerized high-throughput compute jobs on AWS. Covers compute environments, job queues, job definitions, submit-job orchestration, array jobs, multi-no

3 shared topics • 2 shared operations

Bookdown for long-form technical writing with R Markdown. Use this skill when users need to author books, reports, or documentation with chapter cross-references, theorem/equation numbering, citations

3 shared topics • 2 shared operations

Conda and Mamba package/environment management for bioinformatics. Create, export, and reproduce isolated software environments using conda or mamba (fast C++ solver). Manage Bioconda channels, resolv

3 shared topics • 2 shared operations

Poetry is the Python dependency management and packaging tool for creating reproducible projects with pyproject.toml and poetry.lock. Use this skill for dependency resolution, virtual environment isol

3 shared topics • 2 shared operations

Seqera Platform (formerly Nextflow Tower) — cloud orchestration and monitoring platform for Nextflow pipelines. Provides the tw CLI for launching pipelines, managing compute environments (AWS Batch, G

3 shared topics • 2 shared operations