Use this skill for base R numerical optimization with `stats::optim()` and `optimHess()`: unconstrained optimization (Nelder-Mead, BFGS, CG), box-constrained optimization (L-BFGS-B), simulated anneali
Use with AI
Install the MCP server or CLI to instantly fetch Optim documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/optim
CmdStan — command-line interface to the Stan probabilistic programming language for Bayesian statistical modeling and high-performance inference. Compiles Stan programs (.stan) to C++ executables via
1 shared topic • 1 shared operation
Use when working with Convex.jl — a Julia package for Disciplined Convex Programming (DCP) that formulates and solves convex optimization problems with natural mathematical syntax. Covers problem cons
1 shared topic • 1 shared operation
DoE.base is a foundational R package by Ulrike Groemping for full factorial experimental designs and designs based on orthogonal arrays. It provides utility functions for the shared `design` class use
1 shared topic • 1 shared operation
mvabund is an R package providing a model-based approach to analyzing multivariate abundance data in ecology. It offers tools for data visualization, fitting predictive generalized linear models (GLMs
1 shared topic • 1 shared operation
PyStan — Python interface to Stan for Bayesian statistical modeling and high-performance inference. Compile Stan programs (stan.build), draw posterior samples via HMC-NUTS (model.sample), extract draw
1 shared topic • 1 shared operation