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Use when working with iPHoP, the Integrated Phage Host Prediction command-line pipeline for predicting bacterial or archaeal host taxonomy from phage and archaeal virus genomes. Covers `iphop predict`
Use with AI
Install the MCP server or CLI to instantly fetch iPHoP documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/iphop
Streamlines acquisition and use of environmental predictor datasets for Species Distribution Modeling (SDM).
3 shared topics • 2 shared operations
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3 shared topics • 1 shared operation
Import, plot, and analyze bathymetric and topographic data in R. The `marmap` package provides helpers to query ETOPO bathymetry from NOAA, manipulate `bathy` grid objects, draw 2D and 3D seafloor map
3 shared topics • 1 shared operation
Metagenomic phylogenetic analysis tool for profiling microbial community composition from shotgun metagenomics data using clade-specific markers.
3 shared topics • 1 shared operation
VirSorter2 is a multi-classifier pipeline for identifying DNA and RNA viral sequences from metagenomic and genomic assemblies. It supports dsDNA phage, ssDNA, RNA, NCLDV, and lavidaviridae groups, out
3 shared topics • 1 shared operation