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Use when working with GuacaMol — the benchmarking suite for de novo molecular generation — to evaluate generative models for drug-like molecules. Assesses distribution-learning (17 benchmarks: validit
Use with AI
Install the MCP server or CLI to instantly fetch GuacaMol documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/guacamol
LocusZoom — regional association plot generator for GWAS and fine-mapping results. Creates publication-quality locus zoom plots showing -log10(p-value) vs genomic position with LD coloring, recombinat
1 shared topic • 2 shared operations
Use when performing GWAS fine-mapping with PAINTOR (Probabilistic Annotation INTegratOR). Computes posterior inclusion probabilities (PIPs) for causal variants by integrating summary statistics (Z-sco
1 shared topic • 2 shared operations
Use when working with PolyFun — functionally-informed polygenic fine-mapping from GWAS summary statistics. Computes per-SNP heritability priors using S-LDSC with functional annotations, then runs SuSi
1 shared topic • 2 shared operations
scikit-allel — Python package for exploratory analysis of large-scale genetic variation data. Provides data structures for genotypes, haplotypes, and allele counts (GenotypeArray, HaplotypeArray, Alle
1 shared topic • 2 shared operations
vt — C++ command-line variant tool set for manipulating VCF files. Provides variant normalization (left-alignment and trimming), multiallelic decomposition, VCF summary statistics (peek), annotation,
1 shared topic • 2 shared operations