g:Profiler

MycoCLAP (Mycological Characterized and Listed Annotated Proteins) is a manually curated database of biochemically characterized fungal proteins from primary literature. Use when annotating fungal pro

2 shared topics • 2 shared operations

Use when working with DGL (Deep Graph Library) — the Python framework for building and training graph neural networks (GNNs). Apply GCN, GAT, GraphSAGE, GIN, and other GNN architectures to biological

2 shared topics • 1 shared operation

Use when working with GraphSAGE — Graph Sample and Aggregate — an inductive graph neural network framework for learning node embeddings on large graphs. Applies to biological network analysis: protein

2 shared topics • 1 shared operation

ProDy — Python library for protein dynamics analysis and structural bioinformatics. Provides elastic network models (GNM, ANM), principal component analysis (PCA) of structural ensembles and MD trajec

2 shared topics • 1 shared operation

Wm82-tools covers bioinformatics workflows for the Glycine max (soybean) Williams 82 (Wm82) reference genome — the primary reference for soybean genomics. Use cases: downloading and indexing Wm82 geno

2 shared topics • 1 shared operation