dnaPipeTE

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3 shared topics • 1 shared operation

Use when working with resfinder — resFinder — command-line tool for identifying

3 shared topics • 1 shared operation

SOAPdenovo2 — de novo short-read genome assembler for large plant and animal genomes using de Bruijn graph construction. Runs a four-stage pipeline: pregraph (k-mer graph), contig (initial contigs), m

3 shared topics • 1 shared operation

nf-core/mag — Nextflow pipeline for metagenome-assembled genome (MAG) analysis. Takes raw short-read (Illumina) and/or long-read (Nanopore/PacBio) metagenomic sequencing data through quality control,

2 shared topics • 2 shared operations

UCSC (University of California Santa Cruz) Bioinformatics — comprehensive routing for all UCSC genomic tools and resources. Covers the UCSC Genome Browser, Table Browser, UCSC MySQL public database, G

2 shared topics • 2 shared operations