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Artemis and ACT (Artemis Comparison Tool) — Java-based genome browser and annotation suite from the Wellcome Sanger Institute for viewing, creating, and editing sequence features and annotations in EM
Use with AI
Install the MCP server or CLI to instantly fetch Artemis / ACT documentation:
Install command
claude mcp add biocontext7 -- npx @biocontext7/mcpOr share this page: biocontext7.com/tools/artemisact
Anvi'o — integrated analysis and visualization platform for 'omics data. Supports metagenomics (MAG binning, refinement, read recruitment), pangenomics (gene cluster analysis, ANI computation), phylog
1 shared topic • 2 shared operations
Cyrius — CYP2D6 star allele genotyping from whole-genome sequencing data. Call CYP2D6 diplotypes (*1/*2, *4/*5) from BAM/CRAM files for pharmacogenomics clinical reporting. Handles CYP2D6/CYP2D7 fusio
1 shared topic • 2 shared operations
LINX — structural variant annotation and visualization tool from the Hartwig Medical Foundation hmftools suite. Interprets structural variants and copy number data to classify driver events including
1 shared topic • 2 shared operations
NCBI Genome Workbench — desktop application for integrated genomic data visualization, sequence analysis, and annotation. Supports interactive browsing of GenBank/RefSeq entries, multiple sequence ali
1 shared topic • 2 shared operations
scikit-allel — Python package for exploratory analysis of large-scale genetic variation data. Provides data structures for genotypes, haplotypes, and allele counts (GenotypeArray, HaplotypeArray, Alle
1 shared topic • 2 shared operations