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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 671 |
| MutPred2 |
| Population Genetics |
| Population Genetics |
| 35.74 |
| +8% |
| 331 | Mutect2 -- GATK Somatic Short Variant Caller | Genomics | Genomics | 38.74 | +8% |
| 452 | MutationalPatterns | Clinical Genomics | Clinical Genomics | 35.86 | +8% |
| 258 | Mustache | Genomics | Genomics | 38.8 | +8% |
| 20 | MUSCLE | Phylogenetics | Phylogenetics | 62.68 | +15% |
| 670 | muscat | Transcriptomics | Transcriptomics | 35.74 | +8% |
| 547 | Muon | Single-Cell | Single-Cell | 35.8 | +8% |
| 1355 | MungeSumstats | Population Genetics | Population Genetics | 26.7 | +3% |