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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 60 |
| RSEM |
| Transcriptomics |
| Transcriptomics |
| 45.88 |
| +8% |
| 1739 | Rsamtools | Utilities & Infrastructure | Utilities & Infrastructure | 24.3 | +3% |
| 398 | RoseTTAFold | Structure Prediction | Structure Prediction | 36.4 | +8% |
| 893 | Rosetta | Structure Prediction | Structure Prediction | 29.4 | +3% |
| 1033 | ROSE | Epigenomics | Epigenomics | 27.3 | +3% |
| 1738 | ROHan | Other | Other | 24.3 | +3% |
| 1737 | ROBOT | Systems Biology | Systems Biology | 24.3 | +3% |
| 1945 | robis | Metagenomics | Metagenomics | 21.84 | +3% |