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Top bioinformatics tools ranked by usage across 2063 tools.
Data as of: Apr 12, 2026
| 1969 | Whitebox | Other | Other | 21.84 | +3% |
| 1071 | WhiteboxTools | Other | Other | 26.94 | +3% |
| 297 | WiggleTools | Utilities & Infrastructure | Utilities & Infrastructure | 38.8 | +8% |
| 377 | wigToBigWig | Epigenomics | Epigenomics | 36.46 | +8% |
| 90 | Windspharm | Other | Other | 43.66 | +8% |
| 725 | Winnowmap | Genomics | Genomics | 35.74 | +8% |
| 726 | Wm82 Tools | Other | Other | 35.74 | +8% |
| 727 | WNN (Weighted Nearest Neighbor) | Proteomics | Proteomics | 35.74 | +8% |