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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 1625 | Eugene | Systems Biology | Systems Biology | 24.3 | +3% |
| 632 | ETE Toolkit | Phylogenetics | Phylogenetics | 35.74 | +8% |
Data as of: Apr 12, 2026
| 130 |
| Estimate Compute Requirements |
| Single-Cell |
| Single-Cell |
| 40.3 |
| +10% |
| 1874 | ESMValTool | Other | Other | 21.84 | +3% |
| 507 | ESMFold | Structure Prediction | Structure Prediction | 35.8 | +8% |
| 1238 | ESM1v | Genomics | Genomics | 26.7 | +3% |
| 1237 | ESM-2/ESM-IF | Structure Prediction | Structure Prediction | 26.7 | +3% |
| 1236 | ESM-2 | Proteomics | Proteomics | 26.7 | +3% |
| 104 | ESGF (Earth System Grid Federation) | Utilities & Infrastructure | Utilities & Infrastructure | 42.34 | +8% |
| 85 | Escher | Systems Biology | Systems Biology | 44.74 | +8% |