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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 304 | BEDOPS | Utilities & Infrastructure | Utilities & Infrastructure | 38.74 | +8% |
| 145 | bedToBigBed | Genomics | Genomics | 38.86 | +8% |
Data as of: Apr 12, 2026
| 12 | BEDTools | Genomics | Genomics | 64.12 | +17% |
| 1138 | BeetleBase | Other | Other | 26.7 | +3% |
| 1577 | Benchling | Genomics | Genomics | 24.3 | +3% |
| 978 | Benchmark Tools for Task | Transcriptomics | Transcriptomics | 28.86 | +3% |
| 1578 | BERN2 | Machine Learning | Machine Learning | 24.3 | +3% |
| 1044 | Betapart | Other | Other | 27.06 | +3% |
| 728 | Bgen | Clinical Genomics | Clinical Genomics | 35.5 | +8% |
| 743 | bgzip | Utilities & Infrastructure | Utilities & Infrastructure | 29.94 | +3% |