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Top bioinformatics tools ranked by usage across 2063 tools.
| Rank | Tool | Usage | Trend | ||
|---|---|---|---|---|---|
| 713 | SpatialDE -- Spatially Variable Gene Detection | Single-Cell | Single-Cell | 35.74 | +8% |
| 712 | SparsePro | Population Genetics | Population Genetics | 35.74 |
Data as of: Apr 12, 2026
| 711 | SnapHiC | Genomics | Genomics | 35.74 | +8% |
| 710 | Snakemake | Workflows | Workflows | 35.74 | +8% |
| 709 | SimpleITK | Imaging | Imaging | 35.74 | +8% |
| 708 | SHAPEIT4/5 | Genomics | Genomics | 35.74 | +8% |
| 707 | Sequenza | Clinical Genomics | Clinical Genomics | 35.74 | +8% |
| 706 | scRepertoire -- Single-Cell Immune Repertoire Analysis | Genomics | Genomics | 35.74 | +8% |
| 705 | SCRAN.pool | Single-Cell | Single-Cell | 35.74 | +8% |
| 704 | Scout | Clinical Genomics | Clinical Genomics | 35.74 | +8% |