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Top bioinformatics tools ranked by usage across 104 tools.
Data as of: Apr 12, 2026
| 61 | Azimuth | Single-Cell | Single-Cell | 26.7 | +3% |
| 34 | batchelor | Single-Cell | Single-Cell | 35.74 | +8% |
| 99 | BayesSpace | Single-Cell | Single-Cell | 22.68 | +3% |
| 88 | BPCells | Single-Cell | Single-Cell | 24.3 | +3% |
| 9 | BUStools | Single-Cell | Single-Cell | 38.8 | +8% |
| 89 | CATALYST | Single-Cell | Single-Cell | 24.3 | +3% |
| 3 | Cell Ranger | Single-Cell | Single-Cell | 42.94 | +8% |
| 90 | CellBender | Single-Cell | Single-Cell | 24.3 | +3% |