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Top bioinformatics tools ranked by usage across 104 tools.
Data as of: Apr 12, 2026
| 56 | STdeconvolve | Single-Cell | Single-Cell | 29.34 | +3% |
| 51 | scGen | Single-Cell | Single-Cell | 29.4 | +3% |
| 50 | Dynamo | Single-Cell | Single-Cell | 29.7 | +3% |
| 34 | batchelor | Single-Cell | Single-Cell | 35.74 | +8% |
| 35 | CellChat | Single-Cell | Single-Cell | 35.74 | +8% |
| 36 | Cellrank | Single-Cell | Single-Cell | 35.74 | +8% |
| 37 | CellRegMap | Single-Cell | Single-Cell | 35.74 | +8% |
| 38 | CopyKAT | Single-Cell | Single-Cell | 35.74 | +8% |